The role of internal and external nitrogen pools in bermudagrass growth during spring emergence from dormancy

As bermudagrass (Cynodon dactylon (L.) Pers.) transitions from winter dormancy to active growth in spring, nitrogen is essential for new tissue growth. We examined the relative contributions of internally stored nitrogen and that taken up by preexisting and newly produced roots. Field-collected dormant bermudagrass was transferred to a nutrient solution culture system in a growth chamber. Cultures were provided either a non-nitrogen-containing solution or one amended with nitrate labeled with the ¹⁵N isotope of nitrogen, which allowed tracking of endogenous and exogenous N pools in all tissues as growth began. Nitrogen in stolon internodes was the largest N source for early growth. Though mass increased at the same rate in both N treatments over 3 weeks of growth, the unfertilized treatment showed early signs of nitrogen deficiency: low tissue N, slowed leaf elongation, and fewer but longer roots. Preexisting roots were active in absorption almost immediately; new roots were produced quickly and had even higher N uptake rates.     

Laparoscopic inguinal herniorrhaphy with barbed suture in a ram

A 7-month-old Hampshire ram, with no history of trauma or breeding, was referred for treatment of acute, unilateral scrotal swelling. Physical examination revealed a moderately sized, soft, left-sided, non-reducible swelling of the proximal scrotum and mild swelling of the scrotal neck. Ultrasound evaluation of the scrotum revealed morphologically normal testicles and a mild accumulation of free fluid in the left vaginal tunic. Unilateral, laparoscopic inguinal herniorrhaphy under general anesthesia was performed. The herniated omentum was reduced and barbed suture was used to imbricate the internal inguinal ring and the vaginal ring. No recurrence of herniation was reported 5 months after surgery.Key clinical message:Laparoscopic inguinal herniorrhaphy with barbed suture can be a safe and effective means of scrotal hernia resolution in a ram. When performed by a competent surgeon experienced in laparoscopy, this treatment for inguinal and scrotal herniation may minimize post-operative pain, provide a rapid return to function, and preserve normal testicular and scrotal anatomy.     

Parvoviral enteritis and salmonellosis in raccoons with sudden death

Eight of 9 juvenile raccoons at a rehabilitation center died without obvious prior clinical signs. Gross changes were unremarkable except for mildly distended intestines. Microscopically, crypt loss, distension, necrosis, and regeneration with intranuclear viral inclusions were observed in the small intestine, with marked lymphoid depletion and necrosis in Peyer patches and mesenteric lymph nodes. Immunohistochemistry with a canine parvovirus antibody showed intensive signals of parvoviral antigens in the crypts and lymphoid germinal centers. Metagenomic sequencing allowed assembly of a complete parvoviral genome with >99% identity to canine parvovirus 2a, as well as Salmonella enterica subsp. enterica. Also, S. enterica subsp. enterica serovar Thompson with multiple antimicrobial resistance was isolated from the intestinal contents. Concurrent infection with parvovirus and Salmonella should be included as a differential diagnosis in raccoons with sudden death.     

Multiplex PCR for genotyping Flavobacterium columnare

Recent research has identified four distinct genetic groups among isolates of Flavobacterium columnare through multilocus phylogenetic analyses; however, there are no quick methods to determine the genotype of an isolate. The objective of this research was to develop a multiplex PCR to rapidly genotype F. columnare to genetic group. Comparative bacterial genomics was used to identify regions in the genomes unique to each genetic group, and primers were designed to specifically amplify different sized amplicons for each genetic group. The optimized assay was demonstrated to be specific for each genetic group and F. columnare, and no specific amplicons were generated using gDNA from a panel of other Flavobacterium spp. and bacterial fish pathogens. The analytical sensitivity of the assay ranged from 209 to 883 genome equivalents depending on the genetic group. The multiplex PCR was evaluated by genotyping a panel of 22 unknown F. columnare isolates and performing DNA sequencing of the dnaK gene in parallel. The results demonstrated 100% accordance between multiplex PCR results and assignment to genetic group via phylogenetic analysis. The multiplex PCR provides a useful tool for assigning an unknown isolate to genetic group and may be used to determine which genetic groups of F. columnare are circulating and most predominant in different aquaculture industries.     

Lake trout (Salvelinus namaycush) otoliths indicate effects of climate and lake morphology on growth patterns in Arctic lakes

Climate change is occurring rapidly in the Arctic, and an improved understanding of the response of aquatic biota and ecosystems will be important for this data-limited region. Here, we applied biochronology techniques and mixed-effects modelling to assess relationships among growth increments found on lake trout (Salvelinus namaycush) otoliths (N = 49) captured from 13 lakes on the Arctic Coastal Plain of northern Alaska, observed and modelled climate patterns, and individual-level fish and lake characteristics. We found that annual growth varied by year, fish growth slowed significantly as individuals aged, and females grew faster than males. Lake trout had higher growth in flow-through lakes relative to lakes that were perennially or seasonally connected. Annual growth was positively correlated with observed air temperature measurements from a local weather station for the period 1998–2014, but no clear warming trend was evident for this period. Modelled August air temperatures from 1978–2014 predicted lake trout annual growth (root mean squared error = 0.045 mm) and indicated increasing temperatures and annual lake trout growth over the period 1950–2014. This study demonstrated that biochronology techniques can reconstruct recent climate patterns and provide a better understanding of trends in Arctic lake ecosystems under a changing climate.     

Exogenous polyunsaturated fatty acids (PUFAs) influence permeability,antimicrobial peptide resistance,biofilm formation and membrane phospholipid structure in an A-layer and non-A-layer strain of Aeromonas salmonicida

Aeromonas salmonicida is a Gram-negative bacterium that can infect a wide host range of fish populations, including salmonids and non-salmonids as well as freshwater and marine life. Some strains of A. salmonicida cause the disease furunculosis, which can cause lethargy, intestinal inflammation, ulcers, haemorrhaging and death. The infection is spread through fish-to-fish contact, and the presence of infection can have devastating effects on cultivated fish populations. The purpose of this study was to explore the ability of non-A-layer and A-layer A. salmonicida strains to incorporate polyunsaturated fatty acids (PUFAs) into their lipid profile and test the phenotypic effects thereof. Lipids were extracted from PUFA-exposed cultures and analysed for lipid modification by thin-layer chromatography and ultraperformance liquid chromatography-mass spectrometry, showing A. salmonicida, regardless of A-layer, capable of incorporating all seven of the PUFAs studied. Phenotypic effects were determined through the use of assays that tested for biofilm formation, membrane permeability and cyclic peptide susceptibility. Temperature-dependent effects on biofilm formation were observed, and PUFA exposure showed significant (p < .001) increases in membrane permeability as tested by the uptake of the hydrophobic compounds crystal violet and ethidium bromide. Additionally, some PUFAs elicited modest protection and vulnerability against the membrane-targeting cyclic peptides polymyxin B (PMB) and colistin. The diverse, strain-specific responses to exogenous PUFAs may allude to evolved adaptive strategies that enhance survival, persistence and virulence of non-pathogenic and pathogenic members of bacteria that oscillate between environmental and fish host niches.     

Biological life-history and farming scenarios of marine aquaculture to help reduce wild marine fishing pressure

Aquaculture (freshwater and marine) has largely supplemented fisheries, but in theory could help reduce fishing pressure on wild stocks. Although not the sole factors, some potential benefits depend on aquaculture pressures on fished species, including collection of wild ‘seed’ material—earlier to later life stages—for rearing in captivity and the capacity of aquaculture to increase. Here we first classify 203 marine (saltwater and brackish) animal species as being produced by either open-cycle capture-based aquaculture (CBA) or closed-cycle domesticated aquaculture (DA)—based on their likely reliance on wild seed—and assess the extent to which these forms of aquaculture could support seafood production and greater wild biomass. Using a data-limited modelling approach, we find evidence that current aquaculture practices are not necessarily helping reduce fishing to sustainable levels for their wild counterparts—consistent with emerging scientific research. However, if some wild capture species (87 equivalent spp.) were instead produced through CBA, almost a million extra tonnes could theoretically be left in the wild, without reducing seafood production. Alternatively, if reliance on wild seed inputs is further reduced by shifting to DA production, then a little less than doubling of aquaculture of the overexploited species in our study could help fill the ‘production gap’ to support fishing at maximum sustainable levels. While other ecological (e.g. escapes), social and economic considerations (e.g. market substitution) are important, we focused on a critical biological linkage between wild fisheries and aquaculture that provides another aspect on how to improve management alignment of the sectors.     

Effects of an oil-based substrate (The Water Cleanser™) and bacterial additives on nitrogen and phosphorous dynamics in freshwater crayfish (Cherax cainii,Austin and Ryan 2002) aquaculture

Two experiments were conducted to evaluate the efficacy of an oil-based substrate, The Water Cleanser? (TWC). The first experiment studied the effects two substrates of different oil composition (TWC, TWC?+), and a commercial bacterial additive (Bio-Aid) on concentrations of nitrogen and phosphorous in indoor aquaria. The second experiment studied the effects of TWC, a bacterial additive, and a combination (TWC?+?B) on concentrations of nitrogen and phosphorous, phytoplankton abundance and diversity in outdoor freshwater crayfish (Cherax cainii, Austin and Ryan, Invertebr Syst 16:357–367, 2002) tanks. In the first experiment, the concentration of TAN decreased more rapidly with Bio-Aid, whilst the maximum concentrations of NO₂-N and NO₃-N were reduced with the substrates. The concentration of orthophosphate was reduced in aquaria with TWC?+?. In the second experiment, concentrations of TAN, NO₂-N, NO₃-N and total phosphate were not significantly affected by TWC. After addition of TWC?+?B, there was a significant decrease in the concentrations of nitrate and total phosphate, and a higher abundance of phytoplankton was maintained than with other treatments. Additionally, a population Bacillus sp. was found on the substrate surface. TWC had no adverse effects on phytoplankton abundance or diversity, or C. cainii physiology, weight gain or survival. TWC and TWC?+?were effective bioremediators of eutrophic water, whilst a combination of TWC?+?B was effective in short term bioremediation and in promoting phytoplankton abundance in C. cainii tank culture.